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- Congenital genu varum
- congenital giant colon
- congenital giant melanocyte nevi
- congenital giant nevus
- congenital giant pigmented naevus
- Congenital giantism
- Congenital gigantism of peroxidase granules
- congenital glaucoma
- Congenital glottic web of larynx
- Congenital glucose-galactose intolerance
- congenital glucose-galactose malabsorption
- congenital goiter
- Congenital groove
- Congenital growth alteration
- Congenital growth disproportion
- congenital hairy naevus
- congenital half-vertebra deformity
- Congenital hammer toe
- Congenital hearing disorder
- congenital heart block
- congenital heart defect
- congenital heart disease
- congenital heart disease with little cyanosis
- congenital heart disease with no cyanosis
- congenital heart failure
- congenital Heinz body anemia
- congenital Heinz body haemolytic anemia
- Congenital hemangioblastomatosis
- Congenital hemangiomatosis
- congenital hemiparesis
- congenital hemivertebra
- congenital hemolytic anemia
- congenital hemolyticjaundice
- congenital hepatic porphyria
- Congenital hepatomegaly
- congenital hepatorenal dysfunction
- Congenital hernia
- Congenital hernia of bladder
- Congenital hernia of foramen of Bochdalek
- Congenital hernia of foramen of Morgagni
- Congenital herniation
- congenital herpes simplex
- congenital herpes simplex virus infections
- Congenital herpesviral infection
- congenital heterotopia macula
- congenital high scapula
- congenital hip disease
- congenital hip dislocation
- congenital hip dysplasia
- congenital hip joint dislocation
- Congenital HIV infection
- Congenital honeycomb lung
- Congenital human immunodeficiency virus infection
- congenital hydrocele
- congenital hydrocephalus
- congenital hydromyelia
- Congenital hydronephrosis
- Congenital hydroureter
- congenital hyperammonemia
- congenital hyperbilirubinemia
- congenital hypermetropia
- congenital hyperphosphatasemia
- Congenital hyperpigmentation
- Congenital hyperplasia
- Congenital hyperplasia of intrahepatic bile duct
- Congenital hyperplasia of kidney
- Congenital hyperplasia of sebaceous glands of lip
- congenital hyperplastic goiter
- Congenital hyperrotation
- Congenital hypersegmentation
- congenital hypertension of knee
- Congenital hypertonia
- Congenital hypertrichosis
- congenital hypertrichosis lanuginosa
- congenital hypertrophicpyloric stenosis
- Congenital hypertrophy
- Congenital hypertrophy of lip
- Congenital hypertrophy of pylorus
- Congenital hypertrophy of sphenoid bone
- Congenital hypertrophy of tongue
- Congenital hypertrophy of ureteric valve
- congenital hypoaldosteronism
- Congenital hypocupremia
- congenital hypogammaglobulinemia
- congenital hypoimmunoglobulinemia
- congenital hypoparathyroidism
- Congenital hypophosphatasia
- Congenital hypopigmentation
- Congenital hypopigmentation of choroid
- congenital hypopituitarism
- Congenital hypoplasia
- Congenital hypoplasia of aorta
- Congenital hypoplasia of aortic arch
- Congenital hypoplasia of ascending aorta
- Congenital hypoplasia of bile duct
- Congenital hypoplasia of breast
- Congenital hypoplasia of cardiac vein
- Congenital hypoplasia of choroid
- Congenital hypoplasia of lung
- Congenital hypoplasia of pancreas
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